Plot spectrum approx for variable range

The MetaboDecon1D package also comprise the additional function plot_spectrum_superposition_save_as_png() to plot the original spectrum and the superposition of all generated Lorentz curves and save the result as png under the filepath.

Usage

plot_spectrum_superposition_save_as_png(
  deconv_result,
  x_range = c(),
  y_range = c()
)

Arguments

deconv_result

Saved result of the MetaboDecon1D() function

x_range

Row vector with two entries consisting of the ppm start and the ppm end value to scale the range of the x-axis (optional)

y_range

Row vector with two entries consisting of the ppm start and the ppm end value to scale the range of the y-axis (optional)

See also

MetaboDecon1D, calculate_lorentz_curves, plot_triplets, plot_lorentz_curves_save_as_png

Examples

if (FALSE) {
# Load one spectrum (Bruker format)
result <- MetaboDecon1D(
  filepath="load_example_path",
  filename="urine",
  file_format="bruker"
)
plot_spectrum_superposition_save_as_png(result)

# Load more spectra (Bruker format)
result <- MetaboDecon1D(filepath="load_example_path", file_format="bruker")
# Plot superposition of Lorentz curves of all spectra
plot_spectrum_superposition_save_as_png(result)
# Plot superposition of Lorentz curves of one certain investigated spectrum
plot_spectrum_superposition_save_as_png(result$urine)
}